functions to plot out the genome track — plot_genome_track • CompassR

functions to plot out the genome track

Usage

plot_genome_track(
  df,
  gene,
  assembly,
  sample_ids,
  min_x = NULL,
  max_x = NULL,
  bm_host = "https://nov2020.archive.ensembl.org",
  bm_mirror = NULL
)

Arguments

df: gene-cre linkage dataframe
gene: gene to plot
assembly: either mm10 or hg38
sample_ids: samples that want to plot
min_x: setting the minimum range
max_x: setting the maximum range
bm_host: biomart host site
bm_mirror: biomart useat, asia, www

Value

list of plots for genome track

Examples

NA
#> [1] NA