plotEnrichBin

Visualize bin-based GO enrichment results

Usage

plotEnrichBin(bin_enrich, n = 5, qval_cutoff = 0.05, font.size = 12)

Arguments

bin_enrich

A compareClusterResult object, typically from compareEnrichBin().

n

Number of top GO terms to select per bin (default = 5).

qval_cutoff

q-value cutoff for filtering enriched terms (default = 0.05).

font.size

Font size for the plot theme (default = 12).

Value

A ggplot2 object representing the bubble plot

Details

Given the output of compareEnrichBin(), this function generates a bubble plot of enriched GO terms across pseudotime bins. The top terms within each bin are selected based on q-value cutoff and ranking.

Author

Zhicheng Ji, Changxin Wan, Beijie Ji